Add Dockerfiles

#Dockerfile for building scord in rockylinux:8

FROM slurm-docker-cluster:21.08.6

ENV DEPS_SOURCES /deps

ENV DEPS_INSTALL_PATH /usr

# Install basic packages and dependencies available from the distribution

RUN set -ex \

    && dnf makecache \

    && dnf update -y \

    && dnf install -y dnf-plugins-core \

    && dnf config-manager --set-enabled crb \

    && dnf install -y epel-release \

    && dnf install -y \

           git \

           gcc \

           gcc-c++ \

           make \

           automake \

           ninja-build \

           libtool \

           diffutils \

           file \

           cmake \

           libstdc++-static \

           libstdc++ \

           bind-utils \

           # dependencies

           boost-devel \

           json-c-devel \

           hiredis-devel \

           libconfig-devel \

           libfabric \

           libfabric-devel \

           openmpi \

           openmpi-devel \

           boost-openmpi-devel \

    && dnf clean all \

    && rm -rf /var/cache/dnf

### # Install openmpi

### RUN set -ex \

###     && cd \

###     && mkdir deps \

###     && cd deps \

###     && wget https://download.open-mpi.org/release/open-mpi/v4.1/openmpi-4.1.6.tar.bz2 \

###     && tar xvfj openmpi-4.1.6.tar.bz2 \

###     && cd openmpi-4.1.6 \

###     && mkdir build \

###     && cd build \

###     && ../configure \

###         --prefix=${DEPS_INSTALL_PATH} \

###         --with-slurm \

###         --with-pmix=external \

###         --disable-silent-rules \

###         --enable-builtin-atomics \

###         --enable-mpi-cxx \

###         --without-ucx \

###         --without-hcol \

###     && make -j8 all \

###     && make install \

###     && dnf install -y boost-openmpi-devel

###     # TODO: remove openmpi-4 dir

# Download and install dependencies

RUN set -ex \

    && export LD_LIBRARY_PATH=${DEPS_INSTALL_PATH}/lib:${DEPS_INSTALL_PATH}/lib64 \

    && export PKG_CONFIG_PATH=${DEPS_INSTALL_PATH}/lib/pkgconfig:${DEPS_INSTALL_PATH}/lib64/pkgconfig \

    && mkdir -p ${DEPS_SOURCES}  \

    && pushd ${DEPS_SOURCES} \

    # && git clone https://github.com/ofiwg/libfabric --recurse-submodules \

    && git clone https://github.com/pmodels/argobots --recurse-submodules \

    && git clone https://github.com/mercury-hpc/mercury --recurse-submodules \

    && git clone https://github.com/mochi-hpc/mochi-margo --recurse-submodules \

    && git clone https://github.com/sewenew/redis-plus-plus --recurse-submodules \

    && git clone https://github.com/francielizanon/agios --recurse-submodules \

    && git clone https://github.com/USCiLab/cereal --recurse-submodules \

    && git clone https://github.com/mochi-hpc/mochi-thallium --recurse-submodules \

    && git clone https://storage.bsc.es/gitlab/hpc/cargo.git \

    \

    && popd \

    ### argobots

    && pushd ${DEPS_SOURCES}/argobots \

    && ./autogen.sh \

    && mkdir build  \

    && pushd build \

    && CFLAGS="-ggdb3 -O0" ../configure --prefix=${DEPS_INSTALL_PATH} \

    && make install -j \

    && popd \

    && rm -rf build  \

    && popd \

    \

    #    ### libfabric

    #    && pushd ${DEPS_SOURCES}/libfabric \

    #    && git checkout v1.14.0rc3 \

    #    && ./autogen.sh \

    #    && mkdir build  \

    #    && pushd build \

    #    && CFLAGS="-ggdb3 -O0" \

    #        ../configure \

    #        --prefix=${DEPS_INSTALL_PATH} \

    #        --disable-psm3 \

    #    && make install -j \

    #    && popd  \

    #    && rm -rf build  \

    #    && cd \

    \

    ### mercury

    && pushd ${DEPS_SOURCES}/mercury  \

    && mkdir build \

    && pushd build \

    && cmake  \

          -DMERCURY_USE_SELF_FORWARD:BOOL=ON \

          -DBUILD_TESTING:BOOL=ON \

          -DMERCURY_USE_BOOST_PP:BOOL=ON \

          -DCMAKE_INSTALL_PREFIX=${DEPS_INSTALL_PATH}  \

          -DBUILD_SHARED_LIBS:BOOL=ON \

          -DNA_USE_OFI:BOOL=ON  \

          -DCMAKE_POSITION_INDEPENDENT_CODE=ON \

          -DCMAKE_BUILD_TYPE:STRING=Debug  \

          ..  \

    && make install -j \

    && popd  \

    && rm -rf build  \

    && popd \

    \

    ### mochi-margo

    && pushd ${DEPS_SOURCES}/mochi-margo \

    && ./prepare.sh \

    && mkdir build  \

    && pushd build \

    && CFLAGS="-ggdb3 -O0" ../configure --prefix=${DEPS_INSTALL_PATH} \

    && make -j install \

    && popd  \

    && rm -rf build  \

    && popd \

    \

    ### redis-plus-plus

    && pushd ${DEPS_SOURCES}/redis-plus-plus \

    && mkdir build  \

    && pushd build \

    && cmake  \

          -DCMAKE_INSTALL_PREFIX=${DEPS_INSTALL_PATH} \

          -DCMAKE_BUILD_TYPE:STRING=Debug \

          .. \

    && make install -j  \

    && popd  \

    && rm -rf build  \

    && popd \

    \

    ### agios

    && pushd ${DEPS_SOURCES}/agios \

    && git checkout development \

    && mkdir build  \

    && pushd build \

    && cmake  \

          -DCMAKE_INSTALL_PREFIX=${DEPS_INSTALL_PATH} \

          -DCMAKE_BUILD_TYPE:STRING=Debug \

          .. \

    && make install -j  \

    && popd  \

    && rm -rf build  \

    && popd  \

    \

    ### cereal

    && pushd ${DEPS_SOURCES}/cereal \

    && mkdir build  \

    && pushd build  \

    \

    && cmake  \

          -DCMAKE_BUILD_TYPE:STRING=Debug  \

          -DBUILD_DOC:BOOL=OFF \

          -DBUILD_SANDBOX:BOOL=OFF  \

          -DBUILD_TESTS:BOOL=OFF \

          -DSKIP_PERFORMANCE_COMPARISON:BOOL=ON \

          -DCMAKE_INSTALL_PREFIX=${DEPS_INSTALL_PATH} \

          .. \

    && make -j install \

    && popd  \

    && rm -rf build  \

    && popd \

    \

    ### mochi-thallium

    && pushd ${DEPS_SOURCES}/mochi-thallium \

    && mkdir build  \

    && pushd build  \

    && cmake  \

          -DCMAKE_INSTALL_PREFIX=${DEPS_INSTALL_PATH}  \

          -DCMAKE_BUILD_TYPE:STRING=Debug  \

          .. \

    && make -j install  \

    && popd \

    && rm -rf build  \

    && popd \

    # intentionally keep sources so that we can debug

    && chmod a+rwx ${DEPS_SOURCES}